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→ Apply until 08/07/2025 (DD/MM/YYYY) 23:59 (Brussels time)
→ Faculty of Medicine and Health Sciences
→ Department GE31 - Department of Biomolecular Medicine
→ AAP temporary appointment - 100%
→ Number of openings: 1
→ Reference number: 202505/GE31/AS/018
ABOUT GHENT UNIVERSITY
Ghent University is a world of its own. Employing 15.000 people, it is actively involved in education and research, management and administration, and technical and social services on a daily basis. It is one of the largest, most exciting employers in the area and offers great career opportunities. With each of its 11 faculties and more than 100 departments offering state-of-the-art study programmes that are grounded in research in a wide range of academic fields, Ghent University is a logical choice for its employees as well as its students.
YOUR TASKS
Subject of the dissertation: Deep mutational scanning of homologous recombination genes in breast cancer
Homologous recombination (HR) is a vital DNA repair pathway responsible for maintaining genomic integrity by accurately repairing double-strand breaks. Pathogenic variants in several genes involved in this pathway are important for the clinical management of carriers, aiding in prevention, screening, and cancer treatment. The best investigated genes in this context are BRCA1 and BRCA2. In this project, we will focus on less-explored HR genes, including RAD51C, RAD51D, and BRIP1, which are also implicated in breast/ovarian cancer susceptibility. The number of observed unique variants in these genes is increasing due to increasing therapeutic options and improved sampling. With rapid advances in high-throughput molecular and bioinformatic pipelines for sequencing, the bottleneck in genetic testing has largely shifted to the clinical interpretation of detected variants. Due to limited clinical, familial, and epidemiological data, thousands of variants are considered to be variants of uncertain significance (VUS). Variant classification guidelines from the American College of Medical Genetics (ACMG) and the Association for Molecular Pathology (AMP) incorporate functional data as an important source of evidence. For the abovementioned genes, the availability of functional assays is minimal.
To address the experimental burden inherent to the setup of functional assays, we will introduce deep mutational scanning (DMS), which offers a powerful, unbiased method for systematic functional evaluation of all possible substitutions in a target protein. DMS involves the expression of a comprehensive library of variants within a pooled cellular system, coupled with a selection system that reflects the biological function of the target gene. This project aims to functionally classify all potential variants in RAD51C, RAD51D, and BRIP1. Variant effects will be validated in additional cell and zebrafish model systems. The resulting functional datasets will support improved variant interpretation and enhance clinical care for carriers.
WHAT WE ARE LOOKING FOR
WHAT WE CAN OFFER YOU
The interview will take place on Thursday July 17, 2025.
INTERESTED?
Apply online through the e-recruitment system before the application deadline (see above). We do not accept late applications or applications that are not sent through the online system.
Your application must include the following documents:
Note that the maximum file size for each field is 10 MB.
As Ghent University maintains an equal opportunities and diversity policy, everyone is encouraged to apply for this position.
MORE INFORMATION
For more information about this vacancy, please contact Prof. Sven Eyckerman ([email protected], +32 9 224 98 31) and prof. Kathleen Claes ([email protected], +32 9 332 24 78).
Do you have a question regarding the online application process? Please read the FAQ or contact us via [email protected] or +32 9 264 34 36
Ghent University is one of the top 100 universities in the Dutch language area, with more than 44,000 students and 15,000 staff members.
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